MRIQC: individual T1w report

Summary

  • BIDS filename: sub-4014_ses-1_T1w.
  • Date and time: 2022-11-02, 16:41.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.6450836379111651
cnr2.0385354706657797
efc0.5364237368158531
fber1479.5578079222341
fwhmavg3.9734966666666662
fwhmx3.93906
fwhmy4.45697
fwhmz3.52446
icvscsf0.2093211356397187
icvsgm0.4332447646020532
icvswm0.35743409975822815
inumed2.2339916229248047
inurange0.9688920259475706
qi10.0
qi20.005478031142536336
rpvecsf28.568167371693086
rpvegm14.46388808794034
rpvewm20.165597282838238
sizex176
sizey256
sizez256
snrcsf2.912562006746266
snrgm9.08983857787995
snrtotal9.738725211631682
snrwm17.21377505026883
snrdcsf32.36475671757106
snrdgm72.8727816554789
snrdtotal65.9520557700299
snrdwm92.61862893703972
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk3.202471591807676
summarybgmad7.073966193294725
summarybgmean17.831997575138484
summarybgmedian16.495126873254776
summarybgn2502443.0
summarybgp057.020653173327446
summarybgp9533.126577109098434
summarybgstdv8.413137500064472
summarycsfk58.04351233844271
summarycsfmad88.52563407608827
summarycsfmean379.8343017303602
summarycsfmedian349.46493999660015
summarycsfn25504.0
summarycsfp05246.94977132976055
summarycsfp95591.2923609770834
summarycsfstdv119.9830554477373
summarygmk-0.06582916526542082
summarygmmad84.9886509794409
summarygmmean793.1317853729041
summarygmmedian786.8584488630295
summarygmn16474.0
summarygmp05659.2359248913824
summarygmp95948.3334718495607
summarygmstdv86.56199556590221
summarywmk0.45744723440681057
summarywmmad52.54946315018938
summarywmmean1002.8416936851258
summarywmmedian1000.0681879520416
summarywmn166632.0
summarywmp05908.8678583800793
summarywmp951103.7421052008867
summarywmstdv58.096796559635834
tpmoverlapcsf0.16866809129714966
tpmoverlapgm0.45953595638275146
tpmoverlapwm0.5069789886474609
wm2max0.505602697834218
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime17:02:46.420000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20220720
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[-0.0161978, 0.97567, 0.218645, 0.0870195, 0.21922, -0.971787]
ImageOrientationTextSag>Tra(-5.1)>Cor(0.2)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.259
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NonlinearGradientCorrectionTrue
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0293694
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber19
ShimSetting[2641, 5464, -7481, 87, -115, -974, 138, -240]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp226.093
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sumb301474ce9518aa89fc5c8cc133325f8
softwaremriqc
version0.16.1
Rate Image
Download

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.